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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952175.1_cds_XP_016491954.1_82214
CDS Infomation

[gene=LOC107811519] [db_xref=GeneID:107811519] [protein=soluble starch synthase 1, chloroplastic/amyloplastic-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016491954.1] [location=complement(join(<938..993,1074..1182,1260..1384,1990..2079,2162..2224,2542..2633,2888..2969,3172..3345,4122..4203,4933..5057,5155..5232,5531..5898,7290..7599))] [gbkey=CDS]
Sequence

ATGATTGTTGATCTTACAGCAGGCGCCGGTACCCAAATGGGGTCACTGCAAACTTCAAGA
AATCTTTCATGTTTATGTGTATCAGTTAGAGGAGGTGTACAGGGTTTGAGTACTGTAGTT
AGGCAAGTGGGGTTCAATTCTTGGTTATTGCAGGGGCGAATTAGAAGCAGAAAGATCCAA
TCTTTATGTGTTAGAGGTTCCTTTAATAATGCTGGTGGTAGTAGTTCTTCAGAGGAGAAG
GGTCTTCTTTTGGGTGCTGAGAGGGATGGCTCTGGCTCTGTTGTTGGTTTTCAACTGATT
CCCCATTCTGTCACAGGTGATGCAACAATTGTTGAATCTCATGATATTGTAGCTGATGAT
AGAGATGATTTGAGTGAGGATGCTGAACAGAAGGAGAAAACCCCAACCAAATTAACATTC
AATATCATTTTTGTTACTGCTGAAGCAGCTCCGTATTCTAAGACAGGTGGTTTAGGAGAT
GTTTGTGGCTCTTTGCCTGTAGCACTAGCTTCTCGGGGTCATCGTGTAATGGTCGTCTCG
CCTAGGTATCTGAATGGAGGTCCTTCAGATAAAAAGTATGCTAATACTGTTGACCTTGAT
GTGCGGGCTACAGTCCATTGTTTTGGTGGTCCCCAGGAAGTAGCCTACTACCANTGCTTA
TTGTTCAGCTTTATCTTTGTATTCGTGGACCACCCTTCTTATCGCAGACCTGGAACGCCA
TATGGTGATATTTATGGTGCATTTGGTGATAATCAGTTTCGCTTCACTTTGCTTTGTCAC
GCAGCATGTGAAGCACCATTGATTCTTCCACTGGGAGGGTTCACTTATGGAGAGAAGTGC
TTGTTTCTTGCTAATGATTGGCACGCTGCCCTGGTTCCTTTACTTTTAGCAGCCAAGTAT
CGTCCTTATGGTGTTTACGAGGATGCTCGTAGTATTGTCGTAATACACAACATAGCACAT
CAGGGAGTGGAGCCTGCAGCAACCTACCATAATTTGGGATTGCCTCCAGAATGGTATGGA
GCACTTGAATGGATATTTCCCACTTGGGCAAGGGCGCATGCGCTTGACACTGGTGAAACA
GTCAATGTTTTGAAAGGGGCAGTCGCAATTGCTGATCGGATACTGACAGTTAGCCAGGGG
TACTCATGGGAAATAACAACTCCTGAAGGGGGATATGGACTACATGAGCTGTTGACCAGT
AGAAAGTCAGTTCTTAATGGAATTACTAATGGACTAGATGTTAGTGATTGGAACCCATTG
ACAGATGAGCATACTGCTTCACATTACTCCATCAATGACCTCTCTGGAAAGGTTAAGTGC
AAGACTGCTCTGCAAAAGGAGTTGGGACTTCCAATTCGACCCGATTGTCCGCTGATTGGA
TTTATTGGAAGGCTGGACTATCAGAAAGGTGTTGACATAATCCTGTCAGCAATTCCAGAA
CTTATGCAGGATGATGTCCAATTTGTAATGCTTGGATCTGGTGAGAAACAATATGAAAAC
TGGATGAGACATACAGAAAATCTCTTCAAAGACAAATTCCGCGGTTGGGTTGGATTTAAT
GTTCCAGTTTCTCATAGGATAACAGCAGGCTGCGACATACTATTGATGCCCTCAAGATTC
GAACCTTGTGGTTTAAACCAATTGTACGCAATGAGATATGGTACCATACCTGTCGTTCAT
AGCACTGGGGGCCTAAGAGACACGGTGAAGGATTTTAATCCATATGCTCAAGAAGGAGAA
GGTGAAGGTACCGG

Peptide Sequence

PEP ID

XP_016491954.1
PEP Infomation

PREDICTED: soluble starch synthase 1, chloroplastic/amyloplastic-like [Nicotiana tabacum]
Sequence

MIVDLTAGAGTQMGSLQTSRNLSCLCVSVRGGVQGLSTVVRQVGFNSWLLQGRIRSRKIQ
SLCVRGSFNNAGGSSSSEEKGLLLGAERDGSGSVVGFQLIPHSVTGDATIVESHDIVADD
RDDLSEDAEQKEKTPTKLTFNIIFVTAEAAPYSKTGGLGDVCGSLPVALASRGHRVMVVS
PRYLNGGPSDKKYANTVDLDVRATVHCFGGPQEVAYYXCLLFSFIFVFVDHPSYRRPGTP
YGDIYGAFGDNQFRFTLLCHAACEAPLILPLGGFTYGEKCLFLANDWHAALVPLLLAAKY
RPYGVYEDARSIVVIHNIAHQGVEPAATYHNLGLPPEWYGALEWIFPTWARAHALDTGET
VNVLKGAVAIADRILTVSQGYSWEITTPEGGYGLHELLTSRKSVLNGITNGLDVSDWNPL
TDEHTASHYSINDLSGKVKCKTALQKELGLPIRPDCPLIGFIGRLDYQKGVDIILSAIPE
LMQDDVQFVMLGSGEKQYENWMRHTENLFKDKFRGWVGFNVPVSHRITAGCDILLMPSRF
EPCGLNQLYAMRYGTIPVVHSTGGLRDTVKDFNPYAQEGEGEGTGWTFSPLSKEKLLDTL
KVAISTYIEHKSSWEGLMKRGMERDYSWENAAIQYEQVFEWAFIDPPYVR

Transcript Sequence

Gene sequence data has not been registered.